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BIOINFORMATIC ANALYSIS OF GENOMIC ISLANDS IN WHOLE GENOMES OF PISCIRICKETTSIA SALMONIS STRAINS
Table 1 - Conservation of pathogenicity islands with respect to other pathogenicity islands in each strain
Percentage | LF-89 | Psal-006b | Psal-009 | Psal-011 | Psal-001 | Psal-005 | Psal-069 | Psal-072 | LF | EM | Total | Difference |
LF-89 | - | 0.00 | 2.19 | 2.51 | 2.98 | 2.51 | 2.51 | 0.47 | 26.17 | 2.12 | 14.14 | 24.06 |
Psal-006b | 0.00 | - | 4.79 | 0.46 | 0.46 | 0.46 | 0.46 | 0.54 | 26.31 | 0.48 | 13.39 | 25.84 |
Psal-009 | 1.70 | 1.34 | - | 42.82 | 43.04 | 35.87 | 34.25 | 52.98 | 36.47 | 41.53 | 39.00 | 5.07 |
Psal-011 | 1.92 | 2.36 | 42.52 | - | 77.31 | 70.84 | 69.35 | 41.03 | 36.70 | 64.63 | 50.67 | 27.93 |
Psal-001 | 3.98 | 2.84 | 45.33 | 76.00 | - | 67.08 | 66.75 | 42.80 | 32.04 | 69.16 | 50.60 | 37.12 |
Psal-005 | 1.88 | 2.36 | 44.10 | 70.86 | 69.74 | - | 69.31 | 40.74 | 29.80 | 69.95 | 49.87 | 40.15 |
Psal-069 | 2.25 | 2.83 | 45.47 | 83.65 | 82.09 | 84.99 | - | 43.68 | 33.55 | 77.69 | 55.62 | 44.14 |
Psal-072 | 1.85 | 0.74 | 67.18 | 50.07 | 51.04 | 40.78 | 39.22 | - | 29.96 | 57.76 | 43.86 | 27.80 |