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BIOINFORMATIC ANALYSIS OF GENOMIC ISLANDS IN WHOLE GENOMES OF PISCIRICKETTSIA SALMONIS STRAINS

Table 1 - Conservation of pathogenicity islands with respect to genome in each strain of P. salmonis

Percentage

LF-89

Psal-006b

Psal-009

Psal-011

Psal-001

Psal-005

Psal-069

Psal-072

LF

EM

Total

Difference

LF-89

-

99.88

68.38

74.98

74.56

74.98

75.11

67.80

85.81

73.12

79.46

12.70

Psal-006b

99.07

-

69.99

69.54

72.16

69.61

69.54

68.81

84.65

70.03

77.34

14.62

Psal-009

46.16

46.17

-

82.39

82.37

82.37

82.39

82.30

68.68

82.36

75.52

13.68

Psal-011

52.90

52.87

98.73

-

99.76

99.87

100.00

95.64

76.13

98.82

87.47

22.69

Psal-001

57.88

57.80

98.95

99.51

-

99.56

99.51

96.99

78.54

99.01

88.77

20.48

Psal-005

52.18

52.17

98.20

99.83

97.64

-

99.83

93.38

75.59

97.71

86.65

22.12

Psal-069

53.51

53.50

98.63

99.99

99.71

99.84

-

96.26

76.41

98.95

87.68

22.54

Psal072

46.02

46.00

99.53

94.82

94.78

94.82

94.82

-

71.59

96.11

83.85

24.51