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BIOINFORMATIC ANALYSIS OF GENOMIC ISLANDS IN WHOLE GENOMES OF PISCIRICKETTSIA SALMONIS STRAINS
Table 1 - Conservation of pathogenicity islands with respect to genome in each strain of P. salmonis
Percentage | LF-89 | Psal-006b | Psal-009 | Psal-011 | Psal-001 | Psal-005 | Psal-069 | Psal-072 | LF | EM | Total | Difference |
LF-89 | - | 99.88 | 68.38 | 74.98 | 74.56 | 74.98 | 75.11 | 67.80 | 85.81 | 73.12 | 79.46 | 12.70 |
Psal-006b | 99.07 | - | 69.99 | 69.54 | 72.16 | 69.61 | 69.54 | 68.81 | 84.65 | 70.03 | 77.34 | 14.62 |
Psal-009 | 46.16 | 46.17 | - | 82.39 | 82.37 | 82.37 | 82.39 | 82.30 | 68.68 | 82.36 | 75.52 | 13.68 |
Psal-011 | 52.90 | 52.87 | 98.73 | - | 99.76 | 99.87 | 100.00 | 95.64 | 76.13 | 98.82 | 87.47 | 22.69 |
Psal-001 | 57.88 | 57.80 | 98.95 | 99.51 | - | 99.56 | 99.51 | 96.99 | 78.54 | 99.01 | 88.77 | 20.48 |
Psal-005 | 52.18 | 52.17 | 98.20 | 99.83 | 97.64 | - | 99.83 | 93.38 | 75.59 | 97.71 | 86.65 | 22.12 |
Psal-069 | 53.51 | 53.50 | 98.63 | 99.99 | 99.71 | 99.84 | - | 96.26 | 76.41 | 98.95 | 87.68 | 22.54 |
Psal072 | 46.02 | 46.00 | 99.53 | 94.82 | 94.78 | 94.82 | 94.82 | - | 71.59 | 96.11 | 83.85 | 24.51 |